This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JBQ4.1

Spain/LOC_001JBQ4.1/2025-01-09
C. Andres, J. Vila, A. Gonzalez-Sanchez, I. Prats-Mendez, A. Rando-Segura, K. Garcia-Comunas, R. Vaz, M. Carmen Martin, N. Larrosa & A. Anton

Vall d'Hebron Hospital Universitari, Microbiology Department

Sample details

Collection date
2025-01-09
Earliest release date
2026-07-21
Sampling location
Spain
Isolate name
ESP/EVD68/HUVH-102508169/2025

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-07-21
NCBI update date
2026-07-21
INSDC accession

Host

Host

Submission details

Submission ID
PZ685484.1
Submitting group
Date submitted
2026-07-24 09:45:21 UTC
Date released
2026-07-24 10:02:31 UTC

Clade

Clade EV-D68
A2/D

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
51
Total unknown nucs
3
Length
349 (4.7%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2517C
  • C2525G
  • A2544G
  • A2565G
  • A2568G
  • A2569G
  • G2589T
  • G2592A
  • G2595A
  • T2613C
  • G2614A
  • T2616C
  • G2631A
  • A2639G
  • G2655A
  • T2661C
  • G2662A
  • C2670T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:T46S
  • VP1:I61V
  • VP1:G76S
  • VP1:K84R
  • VP1:A92T
  • VP1:S95G
  • VP1:A96E
  • VP1:G97R
  • VP1:T98I
  • VP1:H99D
  • VP1:F103Y
  • VP1:N142S
  • VP1:D144N
  • VP1:M148T
Deletions
N/A
Insertions
N/A

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